Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02737 | Not Available | Negative | 3260694 - 3262319 | 63071.9 |
| ribonuclease hii | HMPREF1065_02738 | Not Available | Positive | 3262421 - 3263026 | 22884.4 |
| l-fucose:h+ symporter permease | HMPREF1065_02739 | Not Available | Negative | 3263169 - 3263999 | 30825.6 |
| l-fucose isomerase | HMPREF1065_02740 | Not Available | Negative | 3264586 - 3266361 | 65624.0 |
| hypothetical protein | HMPREF1065_02741 | Not Available | Negative | 3266397 - 3267377 | 38097.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | HMPREF1065_02742 | Not Available | Positive | 3267826 - 3269340 | 55836.0 |
| hypothetical protein | HMPREF1065_02743 | Not Available | Positive | 3269443 - 3270024 | 22182.7 |
| hypothetical protein | HMPREF1065_02744 | Not Available | Positive | 3270092 - 3271279 | 44482.9 |
| hypothetical protein | HMPREF1065_02745 | Not Available | Positive | 3271547 - 3273403 | 67276.2 |
| hypothetical protein | HMPREF1065_02746 | Not Available | Positive | 3273426 - 3274406 | 35227.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

