Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02717 | Not Available | Positive | 3234216 - 3234377 | 6456.91 |
| hypothetical protein | HMPREF1065_02718 | Not Available | Positive | 3234367 - 3235323 | 36422.5 |
| hypothetical protein | HMPREF1065_02719 | Not Available | Positive | 3235320 - 3236390 | 41120.6 |
| hypothetical protein | HMPREF1065_02720 | Not Available | Positive | 3236411 - 3236659 | 8752.23 |
| hypothetical protein | HMPREF1065_02721 | Not Available | Positive | 3236852 - 3238033 | 42070.9 |
| hypothetical protein | HMPREF1065_02722 | Not Available | Negative | 3237994 - 3238413 | 15789.0 |
| ribosome maturation factor rimp | HMPREF1065_02723 | Not Available | Positive | 3238552 - 3239019 | 17916.3 |
| transcription termination factor nusa | HMPREF1065_02724 | Not Available | Positive | 3239022 - 3240278 | 47697.0 |
| translation initiation factor if-2 | HMPREF1065_02725 | Not Available | Positive | 3240320 - 3243331 | 111208.0 |
| hypothetical protein | HMPREF1065_02726 | Not Available | Positive | 3243470 - 3243973 | 18074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

