Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | HMPREF1065_02707 | Not Available | Positive | 3225151 - 3225660 | 20171.2 |
| hypothetical protein | HMPREF1065_02708 | Not Available | Positive | 3225650 - 3226123 | 18208.8 |
| hypothetical protein | HMPREF1065_02709 | Not Available | Negative | 3226321 - 3227052 | 25877.4 |
| hypothetical protein | HMPREF1065_02710 | Not Available | Positive | 3227159 - 3227863 | 27250.4 |
| hypothetical protein | HMPREF1065_02711 | Not Available | Positive | 3227884 - 3229194 | 49253.2 |
| hypothetical protein | HMPREF1065_02712 | Not Available | Positive | 3229299 - 3229949 | 24721.6 |
| hypothetical protein | HMPREF1065_02713 | Not Available | Positive | 3230130 - 3230375 | 9712.6 |
| hypothetical protein | HMPREF1065_02714 | Not Available | Positive | 3230405 - 3230521 | 4127.07 |
| hypothetical protein | HMPREF1065_02715 | Not Available | Positive | 3230738 - 3231484 | 29475.1 |
| hypothetical protein | HMPREF1065_02716 | Not Available | Positive | 3231550 - 3233973 | 88555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

