Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02697 | Not Available | Negative | 3211733 - 3212191 | 17087.9 |
| hypothetical protein | HMPREF1065_02698 | Not Available | Negative | 3212308 - 3212691 | 15190.0 |
| hypothetical protein | HMPREF1065_02699 | Not Available | Negative | 3212714 - 3214000 | 47985.9 |
| hypothetical protein | HMPREF1065_02700 | Not Available | Positive | 3214135 - 3214659 | 19856.6 |
| hypothetical protein | HMPREF1065_02701 | Not Available | Positive | 3214690 - 3217572 | 110321.0 |
| hypothetical protein | HMPREF1065_02702 | Not Available | Positive | 3217596 - 3219293 | 64431.9 |
| dna topoisomerase i | HMPREF1065_02703 | Not Available | Positive | 3219415 - 3221853 | 91442.4 |
| shikimate kinase | HMPREF1065_02704 | Not Available | Positive | 3221850 - 3222377 | 20411.6 |
| biosynthetic arginine decarboxylase | HMPREF1065_02705 | Not Available | Positive | 3222418 - 3224310 | 71492.0 |
| acetylglutamate kinase | HMPREF1065_02706 | Not Available | Positive | 3224315 - 3225088 | 27055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

