Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02667 | Not Available | Negative | 3179958 - 3181100 | 43360.0 |
| hypothetical protein | HMPREF1065_02668 | Not Available | Positive | 3181503 - 3181826 | 12553.1 |
| higa family addiction module antidote protein | HMPREF1065_02669 | Not Available | Positive | 3181816 - 3182931 | 43337.5 |
| hypothetical protein | HMPREF1065_02670 | Not Available | Positive | 3182941 - 3183075 | 5341.53 |
| hypothetical protein | HMPREF1065_02671 | Not Available | Positive | 3183554 - 3184852 | 49683.4 |
| hypothetical protein | HMPREF1065_02672 | Not Available | Negative | 3184997 - 3185494 | 18643.8 |
| hypothetical protein | HMPREF1065_02673 | Not Available | Negative | 3185507 - 3186121 | 23155.3 |
| hypothetical protein | HMPREF1065_02674 | Not Available | Positive | 3186512 - 3186730 | 7992.84 |
| thioredoxin | HMPREF1065_02675 | Not Available | Positive | 3186733 - 3187212 | 17834.7 |
| hypothetical protein | HMPREF1065_02676 | Not Available | Positive | 3187251 - 3187598 | 13218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

