Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02658 | Not Available | Negative | 3170396 - 3171223 | 30621.4 |
| hypothetical protein | HMPREF1065_02659 | Not Available | Negative | 3171314 - 3173209 | 71521.1 |
| hypothetical protein | HMPREF1065_02660 | Not Available | Negative | 3173238 - 3173525 | 10673.7 |
| hypothetical protein | HMPREF1065_02661 | Not Available | Negative | 3173525 - 3173944 | 15968.9 |
| hypothetical protein | HMPREF1065_02662 | Not Available | Positive | 3174120 - 3174257 | 5393.65 |
| riboflavin biosynthesis protein ribf | HMPREF1065_02663 | Not Available | Negative | 3174241 - 3175161 | 35203.3 |
| had hydrolase, family ia | HMPREF1065_02664 | Not Available | Negative | 3175161 - 3175775 | 24017.6 |
| calcium-translocating p-type atpase, pmca-type | HMPREF1065_02665 | Not Available | Negative | 3175803 - 3178433 | 96973.8 |
| Trna-met | Not Available | Not Available | Positive | 3178590 - 3178666 | Not Available |
| hypothetical protein | HMPREF1065_02666 | Not Available | Negative | 3179022 - 3179663 | 24727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

