Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02598 | Not Available | Positive | 3089482 - 3091365 | 70766.1 |
| dna protecting protein dpra | HMPREF1065_02599 | Not Available | Negative | 3091446 - 3092561 | 41040.6 |
| ybgc/ybaw family acyl-coa thioester hydrolase | HMPREF1065_02600 | Not Available | Negative | 3092558 - 3092965 | 15657.8 |
| hypothetical protein | HMPREF1065_02601 | Not Available | Positive | 3093024 - 3093941 | 34775.1 |
| hypothetical protein | HMPREF1065_02602 | Not Available | Negative | 3094061 - 3094159 | 3991.76 |
| hypothetical protein | HMPREF1065_02603 | Not Available | Positive | 3094482 - 3095738 | 48865.9 |
| lactaldehyde reductase | HMPREF1065_02604 | Not Available | Positive | 3095953 - 3097107 | 40871.7 |
| hypothetical protein | HMPREF1065_02605 | Not Available | Positive | 3097310 - 3100513 | 118610.0 |
| hypothetical protein | HMPREF1065_02606 | Not Available | Positive | 3100541 - 3101317 | 29065.3 |
| hypothetical protein | HMPREF1065_02607 | Not Available | Positive | 3101394 - 3102050 | 24627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

