Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02578 | Not Available | Positive | 3068120 - 3068968 | 32398.6 |
| tonb-dependent receptor | HMPREF1065_02579 | Not Available | Positive | 3069139 - 3071907 | 104324.0 |
| hypothetical protein | HMPREF1065_02580 | Not Available | Positive | 3071919 - 3072890 | 37196.8 |
| hypothetical protein | HMPREF1065_02581 | Not Available | Positive | 3072954 - 3073916 | 33528.8 |
| hypothetical protein | HMPREF1065_02582 | Not Available | Positive | 3073992 - 3075128 | 43827.2 |
| hypothetical protein | HMPREF1065_02583 | Not Available | Positive | 3075159 - 3077036 | 71046.8 |
| phosphopantetheine adenylyltransferase | HMPREF1065_02584 | Not Available | Positive | 3077050 - 3077505 | 17364.1 |
| c-terminal processing peptidase | HMPREF1065_02585 | Not Available | Positive | 3077508 - 3079109 | 60764.6 |
| hypothetical protein | HMPREF1065_02586 | Not Available | Negative | 3079164 - 3079826 | 24025.5 |
| b558 family succinate dehydrogenase (or fumarate reductase) cytochrome b subunit | HMPREF1065_02587 | Not Available | Positive | 3079965 - 3080651 | 25501.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

