Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrabc system protein c | HMPREF1065_02558 | Not Available | Negative | 3041112 - 3042932 | 69869.8 |
| adenine phosphoribosyltransferase | HMPREF1065_02559 | Not Available | Negative | 3043286 - 3043810 | 19180.5 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | HMPREF1065_02560 | Not Available | Negative | 3043870 - 3045741 | 69610.1 |
| hypothetical protein | HMPREF1065_02561 | Not Available | Negative | 3045888 - 3047588 | 62530.4 |
| hypothetical protein | HMPREF1065_02562 | Not Available | Negative | 3047614 - 3048147 | 20232.4 |
| metalloprotein, ybey/upf0054family | HMPREF1065_02563 | Not Available | Negative | 3048382 - 3048798 | 15867.9 |
| hypothetical protein | HMPREF1065_02564 | Not Available | Positive | 3048969 - 3050222 | 48055.2 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_02565 | Not Available | Positive | 3050247 - 3051344 | 40665.4 |
| czca family heavy metal efflux pump | HMPREF1065_02566 | Not Available | Positive | 3051354 - 3054479 | 115246.0 |
| hypothetical protein | HMPREF1065_02567 | Not Available | Positive | 3054519 - 3055193 | 25755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

