Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | HMPREF1065_02548 | Not Available | Negative | 3031208 - 3032029 | 31477.1 |
| 2-dehydropantoate 2-reductase | HMPREF1065_02549 | Not Available | Negative | 3032026 - 3032937 | 33065.2 |
| gtp-binding protein ychf | HMPREF1065_02550 | Not Available | Negative | 3033069 - 3034172 | 40802.8 |
| hypothetical protein | HMPREF1065_02551 | Not Available | Negative | 3034371 - 3034757 | 15062.1 |
| hypothetical protein | HMPREF1065_02552 | Not Available | Negative | 3034784 - 3034996 | 8174.18 |
| dna polymerase i | HMPREF1065_02553 | Not Available | Negative | 3035067 - 3037982 | 109472.0 |
| hypothetical protein | HMPREF1065_02554 | Not Available | Positive | 3038074 - 3039048 | 36218.4 |
| deoxyribose-phosphate aldolase | HMPREF1065_02555 | Not Available | Negative | 3039229 - 3040176 | 34817.3 |
| hypothetical protein | HMPREF1065_02556 | Not Available | Negative | 3040183 - 3040503 | 12299.6 |
| d-tyrosyl-trna(tyr) deacylase | HMPREF1065_02557 | Not Available | Negative | 3040503 - 3040955 | 16634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

