Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02439 | Not Available | Negative | 2893724 - 2894284 | 21549.0 |
| l-aspartate oxidase | HMPREF1065_02440 | Not Available | Positive | 2894440 - 2896020 | 59025.6 |
| hypothetical protein | HMPREF1065_02441 | Not Available | Negative | 2896212 - 2897582 | 51896.3 |
| pectate lyase | HMPREF1065_02442 | Not Available | Negative | 2897599 - 2899740 | 81722.4 |
| hypothetical protein | HMPREF1065_02443 | Not Available | Negative | 2899981 - 2902224 | 85803.0 |
| hypothetical protein | HMPREF1065_02444 | Not Available | Negative | 2902236 - 2904641 | 89754.0 |
| hypothetical protein | HMPREF1065_02445 | Not Available | Negative | 2904768 - 2907176 | 90208.2 |
| hypothetical protein | HMPREF1065_02446 | Not Available | Negative | 2907179 - 2909902 | 103025.0 |
| hypothetical protein | HMPREF1065_02447 | Not Available | Negative | 2910245 - 2910487 | 8798.98 |
| hypothetical protein | HMPREF1065_02448 | Not Available | Negative | 2910494 - 2911243 | 26877.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

