Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02429 | Not Available | Negative | 2879799 - 2882135 | 85649.0 |
| hypothetical protein | HMPREF1065_02430 | Not Available | Negative | 2882197 - 2883720 | 57096.0 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_02431 | Not Available | Negative | 2883727 - 2886783 | 112602.0 |
| hypothetical protein | HMPREF1065_02432 | Not Available | Negative | 2886942 - 2888114 | 43008.6 |
| hypothetical protein | HMPREF1065_02433 | Not Available | Negative | 2888212 - 2889015 | 28590.5 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 1 | HMPREF1065_02434 | Not Available | Negative | 2889052 - 2889894 | 31652.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HMPREF1065_02435 | Not Available | Negative | 2890065 - 2891465 | 52348.7 |
| dihydrolipoyl dehydrogenase | HMPREF1065_02436 | Not Available | Negative | 2891465 - 2892805 | 47693.8 |
| hypothetical protein | HMPREF1065_02437 | Not Available | Negative | 2892821 - 2893234 | 15656.5 |
| hypothetical protein | HMPREF1065_02438 | Not Available | Negative | 2893238 - 2893648 | 15446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

