Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02399 | Not Available | Positive | 2845951 - 2847501 | 58667.8 |
| hypothetical protein | HMPREF1065_02400 | Not Available | Negative | 2847652 - 2848914 | 47014.9 |
| trna dihydrouridine synthase a | HMPREF1065_02401 | Not Available | Positive | 2849065 - 2850054 | 37213.5 |
| hypothetical protein | HMPREF1065_02402 | Not Available | Negative | 2850150 - 2851001 | 29141.2 |
| hypothetical protein | HMPREF1065_02403 | Not Available | Negative | 2851178 - 2852155 | 37776.6 |
| hypothetical protein | HMPREF1065_02404 | Not Available | Negative | 2852146 - 2853192 | 40230.5 |
| cation diffusion facilitator family transporter | HMPREF1065_02405 | Not Available | Negative | 2853203 - 2854144 | 34492.5 |
| ribonuclease r | HMPREF1065_02406 | Not Available | Positive | 2854236 - 2856383 | 82055.5 |
| hypothetical protein | HMPREF1065_02407 | Not Available | Negative | 2856446 - 2856574 | 4771.91 |
| serine o-acetyltransferase | HMPREF1065_02408 | Not Available | Positive | 2856684 - 2857592 | 32826.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

