Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acyl-carrier-protein synthase ii | HMPREF1065_02359 | Not Available | Negative | 2793951 - 2795216 | 44863.9 |
| acyl carrier protein | HMPREF1065_02360 | Not Available | Negative | 2795235 - 2795471 | 8382.75 |
| phosphoribosylglycinamide formyltransferase | HMPREF1065_02361 | Not Available | Positive | 2795624 - 2796202 | 21375.1 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_02362 | Not Available | Negative | 2796174 - 2796719 | 21357.8 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_02363 | Not Available | Positive | 2797040 - 2800081 | 112228.0 |
| hypothetical protein | HMPREF1065_02364 | Not Available | Positive | 2800081 - 2801784 | 63134.5 |
| hypothetical protein | HMPREF1065_02365 | Not Available | Positive | 2802325 - 2803191 | 33000.9 |
| hypothetical protein | HMPREF1065_02366 | Not Available | Positive | 2803188 - 2804114 | 34070.0 |
| hypothetical protein | HMPREF1065_02367 | Not Available | Positive | 2804145 - 2805392 | 46076.8 |
| hypothetical protein | HMPREF1065_02368 | Not Available | Positive | 2805476 - 2806459 | 35445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

