Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2694773 - 2694847 | Not Available |
| 2-amino-3-ketobutyrate coenzyme a ligase | HMPREF1065_02290 | Not Available | Negative | 2694914 - 2696104 | 43601.5 |
| hypothetical protein | HMPREF1065_02291 | Not Available | Positive | 2696276 - 2697229 | 35313.3 |
| hypothetical protein | HMPREF1065_02292 | Not Available | Positive | 2697373 - 2698437 | 38894.4 |
| protein-export membrane protein secd | HMPREF1065_02293 | Not Available | Negative | 2698684 - 2701671 | 109218.0 |
| hypothetical protein | HMPREF1065_02294 | Not Available | Negative | 2701850 - 2703937 | 78978.4 |
| hypothetical protein | HMPREF1065_02295 | Not Available | Negative | 2703964 - 2704989 | 38338.3 |
| hypothetical protein | HMPREF1065_02296 | Not Available | Negative | 2705047 - 2705940 | 33946.6 |
| hypothetical protein | HMPREF1065_02297 | Not Available | Negative | 2705921 - 2706598 | 25391.6 |
| hypothetical protein | HMPREF1065_02298 | Not Available | Positive | 2706809 - 2707081 | 9278.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

