Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02280 | Not Available | Negative | 2678914 - 2679825 | 35960.6 |
| hypothetical protein | HMPREF1065_02281 | Not Available | Negative | 2680094 - 2680597 | 19194.4 |
| hypothetical protein | HMPREF1065_02282 | Not Available | Positive | 2681034 - 2681639 | 22823.3 |
| hypothetical protein | HMPREF1065_02283 | Not Available | Positive | 2681990 - 2686111 | 157678.0 |
| gtp-binding protein typa/bipa | HMPREF1065_02284 | Not Available | Positive | 2686178 - 2687980 | 67347.3 |
| hypothetical protein | HMPREF1065_02285 | Not Available | Negative | 2688042 - 2688674 | 23144.1 |
| phosphoenolpyruvate carboxykinase | HMPREF1065_02286 | Not Available | Negative | 2688800 - 2690407 | 59076.1 |
| uracil phosphoribosyltransferase | HMPREF1065_02287 | Not Available | Positive | 2690668 - 2691327 | 24465.6 |
| hypothetical protein | HMPREF1065_02288 | Not Available | Negative | 2691487 - 2692491 | 36538.8 |
| 2-oxoacid:acceptor oxidoreductase, alpha subunit | HMPREF1065_02289 | Not Available | Negative | 2692515 - 2694362 | 66255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

