Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02120 | Not Available | Positive | 2554337 - 2554903 | 21532.5 |
| hypothetical protein | HMPREF1065_02121 | Not Available | Positive | 2555668 - 2555931 | 10343.2 |
| phage/plasmid primase, p4 family domain-containing protein | HMPREF1065_02122 | Not Available | Positive | 2555939 - 2557576 | 63411.8 |
| hypothetical protein | HMPREF1065_02123 | Not Available | Positive | 2557578 - 2557760 | 7072.34 |
| hypothetical protein | HMPREF1065_02124 | Not Available | Positive | 2557990 - 2558367 | 14675.8 |
| hypothetical protein | HMPREF1065_02125 | Not Available | Positive | 2558364 - 2558771 | 15815.6 |
| hypothetical protein | HMPREF1065_02126 | Not Available | Positive | 2558755 - 2559543 | 29752.7 |
| hypothetical protein | HMPREF1065_02127 | Not Available | Positive | 2559573 - 2559827 | 9649.9 |
| spp1 family phage portal protein | HMPREF1065_02128 | Not Available | Negative | 2560024 - 2561520 | 57727.8 |
| hypothetical protein | HMPREF1065_02129 | Not Available | Negative | 2561517 - 2563151 | 63379.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

