Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | HMPREF1065_02102 | Not Available | Negative | 2541431 - 2542186 | 27227.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | HMPREF1065_02103 | Not Available | Negative | 2542196 - 2542915 | 26680.4 |
| imidazole glycerol phosphate synthase subunit hish | HMPREF1065_02104 | Not Available | Negative | 2542957 - 2543547 | 22284.8 |
| formyltetrahydrofolate deformylase | HMPREF1065_02105 | Not Available | Negative | 2543547 - 2544404 | 33302.5 |
| Trna-asp | Not Available | Not Available | Positive | 2544669 - 2544745 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2544777 - 2544853 | Not Available |
| hypothetical protein | HMPREF1065_02106 | Not Available | Positive | 2544919 - 2545035 | 4557.46 |
| hypothetical protein | HMPREF1065_02107 | Not Available | Positive | 2545069 - 2546208 | 44995.3 |
| hypothetical protein | HMPREF1065_02108 | Not Available | Negative | 2546260 - 2547078 | 31389.9 |
| hypothetical protein | HMPREF1065_02109 | Not Available | Negative | 2547081 - 2548337 | 48235.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

