Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02092 | Not Available | Negative | 2534099 - 2534386 | 10386.4 |
| hypothetical protein | HMPREF1065_02093 | Not Available | Positive | 2534571 - 2534693 | 4854.23 |
| hypothetical protein | HMPREF1065_02094 | Not Available | Positive | 2534785 - 2534991 | 8094.39 |
| hypothetical protein | HMPREF1065_02095 | Not Available | Negative | 2534942 - 2535217 | 10402.5 |
| hypothetical protein | HMPREF1065_02096 | Not Available | Negative | 2535266 - 2536423 | 44873.6 |
| hypothetical protein | HMPREF1065_02097 | Not Available | Positive | 2536628 - 2537134 | 19744.7 |
| diaminopimelate decarboxylase | HMPREF1065_02098 | Not Available | Negative | 2537199 - 2538359 | 42735.3 |
| aspartate kinase | HMPREF1065_02099 | Not Available | Negative | 2538467 - 2539786 | 49326.1 |
| hypothetical protein | HMPREF1065_02100 | Not Available | Negative | 2539894 - 2540649 | 28375.1 |
| histidine biosynthesis hisie | HMPREF1065_02101 | Not Available | Negative | 2540654 - 2541265 | 23196.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

