Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02082 | Not Available | Negative | 2522039 - 2523511 | 56284.2 |
| hypothetical protein | HMPREF1065_02083 | Not Available | Negative | 2523548 - 2524933 | 48577.1 |
| hypothetical protein | HMPREF1065_02084 | Not Available | Negative | 2525187 - 2526845 | 62550.8 |
| hypothetical protein | HMPREF1065_02085 | Not Available | Negative | 2527035 - 2528009 | 35532.3 |
| yggs family pyridoxal phosphate enzyme | HMPREF1065_02086 | Not Available | Negative | 2528023 - 2528691 | 25371.4 |
| hypothetical protein | HMPREF1065_02087 | Not Available | Negative | 2528724 - 2529206 | 18209.6 |
| hypothetical protein | HMPREF1065_02088 | Not Available | Negative | 2529302 - 2530537 | 46220.3 |
| hypothetical protein | HMPREF1065_02089 | Not Available | Positive | 2530643 - 2531905 | 47407.2 |
| hypothetical protein | HMPREF1065_02090 | Not Available | Positive | 2531907 - 2533151 | 46890.5 |
| hypothetical protein | HMPREF1065_02091 | Not Available | Negative | 2533489 - 2534109 | 22139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

