Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF1065_02002 | Not Available | Positive | 2431850 - 2432914 | 40477.4 |
| gdp-mannose 4,6-dehydratase | HMPREF1065_02003 | Not Available | Positive | 2433066 - 2434172 | 42207.8 |
| hypothetical protein | HMPREF1065_02004 | Not Available | Positive | 2434172 - 2435242 | 40244.3 |
| hypothetical protein | HMPREF1065_02005 | Not Available | Negative | 2435438 - 2435941 | 17959.6 |
| hypothetical protein | HMPREF1065_02006 | Not Available | Negative | 2436010 - 2436636 | 22987.3 |
| hypothetical protein | HMPREF1065_02007 | Not Available | Negative | 2436644 - 2438161 | 59314.1 |
| glutamine-trna ligase | HMPREF1065_02008 | Not Available | Negative | 2438172 - 2439911 | 66824.9 |
| phosphate binding protein | HMPREF1065_02009 | Not Available | Negative | 2439969 - 2440787 | 29940.4 |
| phosphate abc transporter, permease pstc | HMPREF1065_02010 | Not Available | Positive | 2441055 - 2442242 | 42892.8 |
| phosphate abc transporter, permease psta | HMPREF1065_02011 | Not Available | Positive | 2442340 - 2443227 | 32162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

