Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase, small subunit | HMPREF1065_01952 | Not Available | Positive | 2371188 - 2372264 | 39978.5 |
| carbamoyl-phosphate synthase, large subunit | HMPREF1065_01953 | Not Available | Positive | 2372288 - 2375515 | 119777.0 |
| pas domain s-box protein | HMPREF1065_01954 | Not Available | Positive | 2375685 - 2378030 | 89676.6 |
| hypothetical protein | HMPREF1065_01955 | Not Available | Negative | 2378273 - 2378713 | 16811.8 |
| hypothetical protein | HMPREF1065_01956 | Not Available | Negative | 2378982 - 2379440 | 17680.3 |
| hypothetical protein | HMPREF1065_01957 | Not Available | Negative | 2379675 - 2380733 | 39454.4 |
| hypothetical protein | HMPREF1065_01958 | Not Available | Positive | 2381235 - 2382323 | 41446.0 |
| hypothetical protein | HMPREF1065_01959 | Not Available | Negative | 2382453 - 2384150 | 64790.8 |
| hypothetical protein | HMPREF1065_01960 | Not Available | Negative | 2384167 - 2384952 | 29303.5 |
| malonyl coa-acyl carrier protein transacylase | HMPREF1065_01961 | Not Available | Negative | 2385077 - 2386069 | 35517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

