Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01913 | Not Available | Negative | 2329483 - 2329902 | 15442.6 |
| hypothetical protein | HMPREF1065_01914 | Not Available | Negative | 2329899 - 2329997 | 3413.4 |
| hypothetical protein | HMPREF1065_01915 | Not Available | Negative | 2330041 - 2330409 | 13743.8 |
| hypothetical protein | HMPREF1065_01916 | Not Available | Negative | 2330430 - 2330930 | 17921.4 |
| hypothetical protein | HMPREF1065_01917 | Not Available | Positive | 2331118 - 2331552 | 16533.8 |
| hypothetical protein | HMPREF1065_01918 | Not Available | Positive | 2331785 - 2332102 | 12287.0 |
| hypothetical protein | HMPREF1065_01919 | Not Available | Positive | 2332096 - 2332632 | 21650.7 |
| glucose-1-phosphate cytidylyltransferase | HMPREF1065_01920 | Not Available | Positive | 2332804 - 2333577 | 29520.3 |
| cdp-glucose 4,6-dehydratase | HMPREF1065_01921 | Not Available | Positive | 2333597 - 2334697 | 41174.9 |
| hypothetical protein | HMPREF1065_01922 | Not Available | Positive | 2334697 - 2335128 | 16064.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

