Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | HMPREF1065_01903 | Not Available | Positive | 2318301 - 2318897 | 22625.5 |
| 50s ribosomal protein l35 | HMPREF1065_01904 | Not Available | Positive | 2318969 - 2319166 | 7367.31 |
| 50s ribosomal protein l20 | HMPREF1065_01905 | Not Available | Positive | 2319278 - 2319628 | 13209.4 |
| hypothetical protein | HMPREF1065_01906 | Not Available | Positive | 2320095 - 2320862 | 28959.8 |
| hypothetical protein | HMPREF1065_01907 | Not Available | Negative | 2321087 - 2322121 | 39489.9 |
| alpha-n-arabinofuranosidase 2 | HMPREF1065_01908 | Not Available | Positive | 2322320 - 2323843 | 57343.4 |
| hypothetical protein | HMPREF1065_01909 | Not Available | Negative | 2323931 - 2324788 | 32341.8 |
| hypothetical protein | HMPREF1065_01910 | Not Available | Positive | 2324913 - 2326262 | 51933.6 |
| hypothetical protein | HMPREF1065_01911 | Not Available | Positive | 2326281 - 2328320 | 79627.4 |
| hypothetical protein | HMPREF1065_01912 | Not Available | Positive | 2328587 - 2329417 | 31788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

