Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01893 | Not Available | Positive | 2307650 - 2308147 | 17990.4 |
| hypothetical protein | HMPREF1065_01894 | Not Available | Positive | 2308273 - 2309232 | 35573.8 |
| hypothetical protein | HMPREF1065_01895 | Not Available | Negative | 2309614 - 2310687 | 38594.7 |
| hypothetical protein | HMPREF1065_01896 | Not Available | Negative | 2310743 - 2311630 | 31002.4 |
| hypothetical protein | HMPREF1065_01897 | Not Available | Negative | 2311641 - 2312474 | 32585.8 |
| hypothetical protein | HMPREF1065_01898 | Not Available | Negative | 2312423 - 2312878 | 17061.9 |
| rnase h-fold protein yqgf | HMPREF1065_01899 | Not Available | Positive | 2313084 - 2313503 | 15873.5 |
| peptide deformylase | HMPREF1065_01900 | Not Available | Positive | 2313527 - 2314081 | 21064.7 |
| hypothetical protein | HMPREF1065_01901 | Not Available | Positive | 2314155 - 2316164 | 77296.4 |
| threonyl-trna synthetase | HMPREF1065_01902 | Not Available | Positive | 2316245 - 2318185 | 74203.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

