Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF1065_01883 | Not Available | Positive | 2293048 - 2294145 | 40351.5 |
| hypothetical protein | HMPREF1065_01884 | Not Available | Positive | 2294164 - 2297211 | 112545.0 |
| hypothetical protein | HMPREF1065_01885 | Not Available | Positive | 2297250 - 2298503 | 46921.7 |
| hypothetical protein | HMPREF1065_01886 | Not Available | Positive | 2298650 - 2299837 | 45227.0 |
| hypothetical protein | HMPREF1065_01887 | Not Available | Positive | 2299824 - 2301530 | 65006.4 |
| sugar porter (sp) family mfs transporter | HMPREF1065_01888 | Not Available | Positive | 2301581 - 2303026 | 52902.7 |
| hypothetical protein | HMPREF1065_01889 | Not Available | Negative | 2303248 - 2306508 | 122888.0 |
| hypothetical protein | HMPREF1065_01890 | Not Available | Negative | 2306538 - 2306804 | 10048.5 |
| hypothetical protein | HMPREF1065_01891 | Not Available | Negative | 2306807 - 2307163 | 13401.3 |
| hypothetical protein | HMPREF1065_01892 | Not Available | Negative | 2307241 - 2307438 | 6773.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

