Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | HMPREF1065_01863 | Not Available | Positive | 2272488 - 2273546 | 40526.6 |
| single-strand binding protein | HMPREF1065_01864 | Not Available | Positive | 2273561 - 2274025 | 17252.3 |
| gliding motility-associated protein glde | HMPREF1065_01865 | Not Available | Positive | 2274062 - 2275420 | 51138.0 |
| hypothetical protein | HMPREF1065_01866 | Not Available | Positive | 2275429 - 2276055 | 24487.2 |
| hypothetical protein | HMPREF1065_01867 | Not Available | Negative | 2276527 - 2278308 | 68772.5 |
| hypothetical protein | HMPREF1065_01868 | Not Available | Negative | 2278327 - 2279016 | 26232.9 |
| l-asparaginase, type i | HMPREF1065_01869 | Not Available | Negative | 2279213 - 2280256 | 38739.7 |
| tryptophan synthase alpha chain | HMPREF1065_01870 | Not Available | Negative | 2280926 - 2281702 | 28969.2 |
| n-(5'-phosphoribosyl)anthranilate isomerase | HMPREF1065_01871 | Not Available | Negative | 2281699 - 2282316 | 22997.8 |
| hypothetical protein | HMPREF1065_01872 | Not Available | Negative | 2282329 - 2283117 | 29416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

