Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01853 | Not Available | Positive | 2261398 - 2262642 | 47233.8 |
| had hydrolase, family ia | HMPREF1065_01854 | Not Available | Negative | 2262755 - 2263489 | 27061.4 |
| glucose-6-phosphate isomerase | HMPREF1065_01855 | Not Available | Negative | 2263641 - 2264984 | 48991.8 |
| hypothetical protein | HMPREF1065_01856 | Not Available | Negative | 2264998 - 2265993 | 37075.1 |
| lysyl-trna synthetase | HMPREF1065_01857 | Not Available | Negative | 2266049 - 2267779 | 66431.2 |
| hypothetical protein | HMPREF1065_01858 | Not Available | Negative | 2267854 - 2268462 | 23053.1 |
| hypothetical protein | HMPREF1065_01859 | Not Available | Positive | 2268693 - 2269235 | 20263.0 |
| hypothetical protein | HMPREF1065_01860 | Not Available | Positive | 2269242 - 2270048 | 30801.2 |
| rne/rng family ribonuclease | HMPREF1065_01861 | Not Available | Negative | 2270220 - 2271794 | 59689.8 |
| hypothetical protein | HMPREF1065_01862 | Not Available | Negative | 2272033 - 2272308 | 10172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

