Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01833 | Not Available | Positive | 2231573 - 2234233 | 102599.0 |
| hypothetical protein | HMPREF1065_01834 | Not Available | Negative | 2234292 - 2234969 | 25615.2 |
| hypothetical protein | HMPREF1065_01835 | Not Available | Negative | 2234966 - 2235895 | 35799.6 |
| hypothetical protein | HMPREF1065_01836 | Not Available | Negative | 2236415 - 2237200 | 29932.2 |
| hypothetical protein | HMPREF1065_01837 | Not Available | Positive | 2237526 - 2238230 | 26976.7 |
| hypothetical protein | HMPREF1065_01838 | Not Available | Negative | 2238496 - 2239875 | 51480.0 |
| hypothetical protein | HMPREF1065_01839 | Not Available | Negative | 2239908 - 2243033 | 115706.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_01840 | Not Available | Negative | 2243033 - 2244100 | 39220.2 |
| hypothetical protein | HMPREF1065_01841 | Not Available | Positive | 2244268 - 2245146 | 34057.5 |
| tigr02757 family protein | HMPREF1065_01842 | Not Available | Positive | 2245197 - 2245961 | 29723.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

