Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01823 | Not Available | Positive | 2213998 - 2216565 | 98631.7 |
| hypothetical protein | HMPREF1065_01824 | Not Available | Positive | 2216582 - 2218906 | 86818.1 |
| cyclically-permuted mutarotase | HMPREF1065_01825 | Not Available | Positive | 2219001 - 2220128 | 40403.5 |
| hypothetical protein | HMPREF1065_01826 | Not Available | Positive | 2220125 - 2222179 | 76927.7 |
| hypothetical protein | HMPREF1065_01827 | Not Available | Positive | 2222206 - 2224458 | 85557.6 |
| hypothetical protein | HMPREF1065_01828 | Not Available | Positive | 2224461 - 2226965 | 93938.6 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF1065_01829 | Not Available | Positive | 2226972 - 2228303 | 48822.5 |
| hypothetical protein | HMPREF1065_01830 | Not Available | Negative | 2228388 - 2229026 | 24451.7 |
| hypothetical protein | HMPREF1065_01831 | Not Available | Negative | 2229097 - 2230530 | 55074.2 |
| hypothetical protein | HMPREF1065_01832 | Not Available | Positive | 2230702 - 2231568 | 32946.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

