Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01764 | Not Available | Negative | 2141974 - 2142420 | 17228.0 |
| 30s ribosomal protein s6 | HMPREF1065_01765 | Not Available | Positive | 2142630 - 2142974 | 13427.3 |
| 30s ribosomal protein s18 | HMPREF1065_01766 | Not Available | Positive | 2142977 - 2143246 | 10561.2 |
| 50s ribosomal protein l9 | HMPREF1065_01767 | Not Available | Positive | 2143262 - 2143705 | 16173.9 |
| hypothetical protein | HMPREF1065_01768 | Not Available | Negative | 2144212 - 2144307 | 3688.53 |
| hypothetical protein | HMPREF1065_01769 | Not Available | Negative | 2144349 - 2144465 | 4413.5 |
| hypothetical protein | HMPREF1065_01770 | Not Available | Negative | 2144621 - 2144821 | 6693.74 |
| hypothetical protein | HMPREF1065_01771 | Not Available | Negative | 2144982 - 2146655 | 63335.5 |
| miab-like trna modifying enzyme | HMPREF1065_01772 | Not Available | Positive | 2146761 - 2148077 | 49200.9 |
| hypothetical protein | HMPREF1065_01773 | Not Available | Positive | 2148084 - 2149109 | 39406.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

