Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01754 | Not Available | Negative | 2130511 - 2131137 | 24869.6 |
| hypothetical protein | HMPREF1065_01755 | Not Available | Negative | 2131190 - 2132176 | 38311.2 |
| hypothetical protein | HMPREF1065_01756 | Not Available | Negative | 2132183 - 2134834 | 100740.0 |
| hypothetical protein | HMPREF1065_01757 | Not Available | Negative | 2134878 - 2135069 | 7394.54 |
| hypothetical protein | HMPREF1065_01758 | Not Available | Negative | 2135207 - 2136337 | 43310.5 |
| hypothetical protein | HMPREF1065_01759 | Not Available | Negative | 2136376 - 2136489 | 4392.39 |
| translation elongation factor g | HMPREF1065_01760 | Not Available | Positive | 2136522 - 2138681 | 80532.6 |
| sensor protein rprx | HMPREF1065_01761 | Not Available | Positive | 2138914 - 2140512 | 60906.9 |
| transcriptional regulatory protein rpry | HMPREF1065_01762 | Not Available | Positive | 2140514 - 2141212 | 26811.6 |
| hypothetical protein | HMPREF1065_01763 | Not Available | Negative | 2141683 - 2141865 | 6168.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

