Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01724 | Not Available | Positive | 2083335 - 2086511 | 120993.0 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF1065_01725 | Not Available | Positive | 2086601 - 2087764 | 42246.9 |
| sua5/ycio/yrdc/ywlc family protein | HMPREF1065_01726 | Not Available | Positive | 2087933 - 2088508 | 21176.4 |
| hypothetical protein | HMPREF1065_01727 | Not Available | Positive | 2088517 - 2090319 | 67010.9 |
| methionyl-trna formyltransferase | HMPREF1065_01728 | Not Available | Positive | 2090333 - 2091307 | 36666.5 |
| hypothetical protein | HMPREF1065_01729 | Not Available | Negative | 2091455 - 2092195 | 27402.4 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_01730 | Not Available | Positive | 2092395 - 2092937 | 20869.1 |
| hypothetical protein | HMPREF1065_01731 | Not Available | Positive | 2092940 - 2094235 | 48299.8 |
| ribulose-phosphate 3-epimerase | HMPREF1065_01732 | Not Available | Positive | 2094311 - 2094964 | 24013.6 |
| hypothetical protein | HMPREF1065_01733 | Not Available | Positive | 2095011 - 2096930 | 72778.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

