Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01714 | Not Available | Positive | 2069660 - 2069965 | 11230.5 |
| hypothetical protein | HMPREF1065_01715 | Not Available | Positive | 2070204 - 2070452 | 8910.83 |
| hypothetical protein | HMPREF1065_01716 | Not Available | Positive | 2070518 - 2071618 | 41909.2 |
| hypothetical protein | HMPREF1065_01717 | Not Available | Positive | 2071682 - 2073586 | 73625.5 |
| signal peptidase i | HMPREF1065_01718 | Not Available | Positive | 2073595 - 2074497 | 35430.2 |
| hypothetical protein | HMPREF1065_01719 | Not Available | Positive | 2074499 - 2076010 | 58422.4 |
| hypothetical protein | HMPREF1065_01720 | Not Available | Positive | 2076013 - 2077662 | 62407.8 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_01721 | Not Available | Positive | 2077715 - 2078782 | 39210.3 |
| hypothetical protein | HMPREF1065_01722 | Not Available | Positive | 2078787 - 2081867 | 115269.0 |
| hypothetical protein | HMPREF1065_01723 | Not Available | Positive | 2081854 - 2083338 | 56784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

