Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01694 | Not Available | Negative | 2042960 - 2046976 | 154450.0 |
| phosphoribosylformylglycinamidine synthase | HMPREF1065_01695 | Not Available | Negative | 2047054 - 2050758 | 137066.0 |
| hypothetical protein | HMPREF1065_01696 | Not Available | Positive | 2050909 - 2051568 | 24319.7 |
| hypothetical protein | HMPREF1065_01697 | Not Available | Positive | 2051640 - 2052182 | 21294.0 |
| dtdp-4-dehydrorhamnose reductase | HMPREF1065_01698 | Not Available | Positive | 2052197 - 2053054 | 32005.2 |
| peptide chain release factor 3 | HMPREF1065_01699 | Not Available | Positive | 2053061 - 2054629 | 59968.5 |
| hypothetical protein | HMPREF1065_01700 | Not Available | Negative | 2054706 - 2055488 | 29051.0 |
| hypothetical protein | HMPREF1065_01701 | Not Available | Positive | 2055595 - 2056479 | 32666.2 |
| hypothetical protein | HMPREF1065_01702 | Not Available | Negative | 2056462 - 2057250 | 28112.9 |
| hypothetical protein | HMPREF1065_01703 | Not Available | Positive | 2057754 - 2059511 | 66286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

