Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01684 | Not Available | Positive | 2027434 - 2027655 | 8766.94 |
| hypothetical protein | HMPREF1065_01685 | Not Available | Positive | 2027674 - 2028165 | 17847.5 |
| hypothetical protein | HMPREF1065_01686 | Not Available | Negative | 2028274 - 2030580 | 85969.3 |
| hypothetical protein | HMPREF1065_01687 | Not Available | Negative | 2030637 - 2031668 | 39606.7 |
| excinuclease abc subunit a | HMPREF1065_01688 | Not Available | Negative | 2031920 - 2034721 | 104894.0 |
| hypothetical protein | HMPREF1065_01689 | Not Available | Positive | 2034803 - 2036302 | 58017.4 |
| hypothetical protein | HMPREF1065_01690 | Not Available | Negative | 2036662 - 2039133 | 95524.3 |
| hypothetical protein | HMPREF1065_01691 | Not Available | Negative | 2039221 - 2041824 | 100406.0 |
| hypothetical protein | HMPREF1065_01692 | Not Available | Negative | 2041838 - 2042410 | 21097.4 |
| chromate ion transporter (chr) family chromate transporter | HMPREF1065_01693 | Not Available | Negative | 2042407 - 2042955 | 20470.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

