Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01674 | Not Available | Negative | 2014627 - 2015190 | 21669.8 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | HMPREF1065_01675 | Not Available | Negative | 2015252 - 2016019 | 27768.6 |
| bifunctional enzyme lpxc/fabz | HMPREF1065_01676 | Not Available | Negative | 2016036 - 2017421 | 51185.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | HMPREF1065_01677 | Not Available | Negative | 2017427 - 2018467 | 36860.4 |
| hypothetical protein | HMPREF1065_01678 | Not Available | Negative | 2018600 - 2019835 | 47203.2 |
| orotidine 5'-phosphate decarboxylase | HMPREF1065_01679 | Not Available | Negative | 2019926 - 2020744 | 30601.6 |
| peptide chain release factor 1 | HMPREF1065_01680 | Not Available | Negative | 2020781 - 2021896 | 42004.6 |
| hypothetical protein | HMPREF1065_01681 | Not Available | Negative | 2022139 - 2023308 | 42707.2 |
| hypothetical protein | HMPREF1065_01682 | Not Available | Negative | 2024259 - 2025938 | 64261.8 |
| hypothetical protein | HMPREF1065_01683 | Not Available | Positive | 2026017 - 2027447 | 52455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

