Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01664 | Not Available | Positive | 2000465 - 2002114 | 61677.1 |
| hypothetical protein | HMPREF1065_01665 | Not Available | Positive | 2002131 - 2003354 | 46621.3 |
| hypothetical protein | HMPREF1065_01666 | Not Available | Positive | 2003566 - 2003928 | 14012.8 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | HMPREF1065_01667 | Not Available | Positive | 2003962 - 2005848 | 70687.0 |
| hypothetical protein | HMPREF1065_01668 | Not Available | Positive | 2005859 - 2007202 | 51761.7 |
| hypothetical protein | HMPREF1065_01669 | Not Available | Positive | 2007233 - 2008423 | 45049.2 |
| hypothetical protein | HMPREF1065_01670 | Not Available | Positive | 2008444 - 2010552 | 80342.8 |
| hypothetical protein | HMPREF1065_01671 | Not Available | Positive | 2010674 - 2011447 | 29740.3 |
| hypothetical protein | HMPREF1065_01672 | Not Available | Negative | 2011625 - 2013664 | 76814.4 |
| trna dimethylallyltransferase 1 | HMPREF1065_01673 | Not Available | Negative | 2013673 - 2014575 | 35021.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

