Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01644 | Not Available | Positive | 1959701 - 1962505 | 107032.0 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_01645 | Not Available | Positive | 1962706 - 1963221 | 20741.8 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01646 | Not Available | Positive | 1963265 - 1966531 | 121111.0 |
| hypothetical protein | HMPREF1065_01647 | Not Available | Positive | 1966551 - 1968464 | 72003.0 |
| hypothetical protein | HMPREF1065_01648 | Not Available | Positive | 1968686 - 1969378 | 25400.1 |
| hypothetical protein | HMPREF1065_01649 | Not Available | Positive | 1970715 - 1971647 | 36051.2 |
| hypothetical protein | HMPREF1065_01650 | Not Available | Positive | 1971785 - 1973389 | 60837.9 |
| hypothetical protein | HMPREF1065_01651 | Not Available | Positive | 1973500 - 1975047 | 55994.8 |
| hypothetical protein | HMPREF1065_01652 | Not Available | Positive | 1975087 - 1977366 | 87109.1 |
| hypothetical protein | HMPREF1065_01653 | Not Available | Positive | 1977515 - 1979131 | 61299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

