Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01626 | Not Available | Negative | 1924965 - 1926815 | 70642.0 |
| hypothetical protein | HMPREF1065_01627 | Not Available | Negative | 1926947 - 1927333 | 15243.1 |
| Trna-met | Not Available | Not Available | Positive | 1927537 - 1927613 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1927672 - 1927745 | Not Available |
| hypothetical protein | HMPREF1065_01628 | Not Available | Positive | 1927918 - 1930722 | 106483.0 |
| hypothetical protein | HMPREF1065_01629 | Not Available | Positive | 1930956 - 1932182 | 46630.6 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01630 | Not Available | Positive | 1932207 - 1932752 | 21095.3 |
| hypothetical protein | HMPREF1065_01631 | Not Available | Positive | 1932765 - 1934648 | 72317.9 |
| hypothetical protein | HMPREF1065_01632 | Not Available | Positive | 1934661 - 1936250 | 60205.7 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01633 | Not Available | Positive | 1936358 - 1939438 | 114651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

