Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01616 | Not Available | Positive | 1913396 - 1914811 | 53232.8 |
| l-rhamnose mutarotase | HMPREF1065_01617 | Not Available | Positive | 1914848 - 1915162 | 12228.6 |
| hypothetical protein | HMPREF1065_01618 | Not Available | Positive | 1915232 - 1919530 | 163277.0 |
| hypothetical protein | HMPREF1065_01619 | Not Available | Negative | 1919618 - 1919836 | 7895.11 |
| 50s ribosomal protein l19 | HMPREF1065_01620 | Not Available | Negative | 1919989 - 1920342 | 13130.2 |
| hypothetical protein | HMPREF1065_01621 | Not Available | Positive | 1920541 - 1921272 | 26071.2 |
| hypothetical protein | HMPREF1065_01622 | Not Available | Positive | 1921247 - 1921966 | 27754.0 |
| hypothetical protein | HMPREF1065_01623 | Not Available | Positive | 1922084 - 1922251 | 5717.65 |
| hypothetical protein | HMPREF1065_01624 | Not Available | Negative | 1922430 - 1923623 | 43151.6 |
| riboflavin biosynthesis protein ribba | HMPREF1065_01625 | Not Available | Negative | 1923748 - 1924962 | 44989.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

