Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01606 | Not Available | Negative | 1894088 - 1894669 | 23103.8 |
| hypothetical protein | HMPREF1065_01607 | Not Available | Positive | 1894806 - 1895825 | 39104.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01608 | Not Available | Positive | 1895943 - 1899482 | 130847.0 |
| hypothetical protein | HMPREF1065_01609 | Not Available | Positive | 1899501 - 1901378 | 70190.4 |
| pectate lyase | HMPREF1065_01610 | Not Available | Positive | 1901471 - 1902979 | 57108.4 |
| hypothetical protein | HMPREF1065_01611 | Not Available | Positive | 1902988 - 1905228 | 84367.9 |
| hypothetical protein | HMPREF1065_01612 | Not Available | Positive | 1905285 - 1907402 | 81175.0 |
| hypothetical protein | HMPREF1065_01613 | Not Available | Positive | 1907676 - 1910027 | 89811.7 |
| hypothetical protein | HMPREF1065_01614 | Not Available | Positive | 1910091 - 1911479 | 52211.9 |
| hypothetical protein | HMPREF1065_01615 | Not Available | Positive | 1911476 - 1913383 | 70614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

