Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01596 | Not Available | Positive | 1870287 - 1873353 | 113437.0 |
| hypothetical protein | HMPREF1065_01597 | Not Available | Positive | 1873377 - 1875689 | 86082.9 |
| hypothetical protein | HMPREF1065_01598 | Not Available | Positive | 1875947 - 1876924 | 37263.8 |
| hypothetical protein | HMPREF1065_01599 | Not Available | Positive | 1877018 - 1878343 | 50005.5 |
| hypothetical protein | HMPREF1065_01600 | Not Available | Positive | 1878357 - 1879751 | 51575.4 |
| hypothetical protein | HMPREF1065_01601 | Not Available | Positive | 1879765 - 1882620 | 106499.0 |
| hypothetical protein | HMPREF1065_01602 | Not Available | Positive | 1882826 - 1885831 | 114654.0 |
| hypothetical protein | HMPREF1065_01603 | Not Available | Positive | 1885956 - 1887782 | 66938.7 |
| hypothetical protein | HMPREF1065_01604 | Not Available | Positive | 1887930 - 1889573 | 60942.2 |
| hypothetical protein | HMPREF1065_01605 | Not Available | Positive | 1889595 - 1892891 | 124901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

