Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01556 | Not Available | Negative | 1810408 - 1811358 | 35041.6 |
| hypothetical protein | HMPREF1065_01557 | Not Available | Negative | 1811441 - 1812835 | 51546.0 |
| hypothetical protein | HMPREF1065_01558 | Not Available | Positive | 1812912 - 1813745 | 31812.4 |
| hypothetical protein | HMPREF1065_01559 | Not Available | Positive | 1813869 - 1814822 | 38449.4 |
| hypothetical protein | HMPREF1065_01560 | Not Available | Positive | 1814873 - 1814974 | 3887.35 |
| hypothetical protein | HMPREF1065_01561 | Not Available | Negative | 1814979 - 1816295 | 49359.3 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_01562 | Not Available | Negative | 1816308 - 1817402 | 40037.4 |
| hypothetical protein | HMPREF1065_01563 | Not Available | Negative | 1817476 - 1818717 | 45564.9 |
| hypothetical protein | HMPREF1065_01564 | Not Available | Negative | 1818722 - 1819978 | 46682.1 |
| hypothetical protein | HMPREF1065_01565 | Not Available | Negative | 1819988 - 1820707 | 26742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

