Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1798111 - 1798195 | Not Available |
| hypothetical protein | HMPREF1065_01547 | Not Available | Negative | 1798263 - 1799291 | 39227.1 |
| hypothetical protein | HMPREF1065_01548 | Not Available | Negative | 1799300 - 1800145 | 32038.2 |
| hypothetical protein | HMPREF1065_01549 | Not Available | Negative | 1800149 - 1802842 | 102684.0 |
| glycine-trna ligase | HMPREF1065_01550 | Not Available | Positive | 1802994 - 1804535 | 59421.0 |
| hypothetical protein | HMPREF1065_01551 | Not Available | Positive | 1804549 - 1805187 | 23128.3 |
| aspartate-semialdehyde dehydrogenase | HMPREF1065_01552 | Not Available | Negative | 1805702 - 1806712 | 37267.8 |
| hypothetical protein | HMPREF1065_01553 | Not Available | Positive | 1806878 - 1809025 | 80182.6 |
| hypothetical protein | HMPREF1065_01554 | Not Available | Positive | 1809012 - 1809734 | 27156.2 |
| lipoprotein-releasing system atp-binding protein lold | HMPREF1065_01555 | Not Available | Positive | 1809737 - 1810396 | 23895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

