Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01519 | Not Available | Negative | 1755450 - 1755791 | 13375.0 |
| hypothetical protein | HMPREF1065_01520 | Not Available | Negative | 1756008 - 1757516 | 56887.3 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01521 | Not Available | Negative | 1757538 - 1760759 | 118912.0 |
| hypothetical protein | HMPREF1065_01522 | Not Available | Negative | 1761464 - 1762267 | 30676.8 |
| adenylosuccinate synthetase | HMPREF1065_01523 | Not Available | Negative | 1762568 - 1763839 | 46838.8 |
| hypothetical protein | HMPREF1065_01524 | Not Available | Negative | 1763856 - 1764347 | 19166.0 |
| hypothetical protein | HMPREF1065_01525 | Not Available | Negative | 1764378 - 1765046 | 25616.1 |
| hypothetical protein | HMPREF1065_01526 | Not Available | Negative | 1765055 - 1767067 | 76530.1 |
| hypothetical protein | HMPREF1065_01527 | Not Available | Negative | 1767174 - 1767641 | 18149.8 |
| atp-dependent dna helicase recq | HMPREF1065_01528 | Not Available | Positive | 1767973 - 1769790 | 69068.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

