Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01509 | Not Available | Negative | 1737735 - 1739747 | 75033.9 |
| hypothetical protein | HMPREF1065_01510 | Not Available | Negative | 1739795 - 1741738 | 73552.2 |
| hypothetical protein | HMPREF1065_01511 | Not Available | Negative | 1742135 - 1743808 | 62993.8 |
| hypothetical protein | HMPREF1065_01512 | Not Available | Negative | 1743826 - 1745514 | 64097.1 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01513 | Not Available | Negative | 1745528 - 1748848 | 122289.0 |
| hypothetical protein | HMPREF1065_01514 | Not Available | Negative | 1749098 - 1750111 | 39154.6 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01515 | Not Available | Negative | 1750183 - 1750773 | 23200.0 |
| hypothetical protein | HMPREF1065_01516 | Not Available | Negative | 1750949 - 1752841 | 71385.7 |
| hypothetical protein | HMPREF1065_01517 | Not Available | Negative | 1753119 - 1753970 | 32455.8 |
| hypothetical protein | HMPREF1065_01518 | Not Available | Negative | 1754471 - 1755406 | 36544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

