Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01499 | Not Available | Positive | 1722838 - 1725261 | 91991.8 |
| hypothetical protein | HMPREF1065_01500 | Not Available | Negative | 1725497 - 1726459 | 36819.0 |
| hypothetical protein | HMPREF1065_01501 | Not Available | Negative | 1726446 - 1728275 | 69926.0 |
| homoserine o-succinyltransferase | HMPREF1065_01502 | Not Available | Negative | 1728272 - 1729189 | 35688.8 |
| glycosyl hydrolase family 109 protein 5 | HMPREF1065_01503 | Not Available | Positive | 1729571 - 1731136 | 58297.1 |
| hypothetical protein | HMPREF1065_01504 | Not Available | Negative | 1731253 - 1731549 | 11419.0 |
| hypothetical protein | HMPREF1065_01505 | Not Available | Negative | 1731600 - 1732769 | 43932.7 |
| czca family heavy metal efflux pump | HMPREF1065_01506 | Not Available | Negative | 1732779 - 1735862 | 112427.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_01507 | Not Available | Negative | 1735875 - 1737110 | 45049.9 |
| hypothetical protein | HMPREF1065_01508 | Not Available | Negative | 1737206 - 1737706 | 18991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

