Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01489 | Not Available | Negative | 1710828 - 1711709 | 32714.9 |
| dna repair protein rada | HMPREF1065_01490 | Not Available | Positive | 1711966 - 1713333 | 49905.5 |
| hypothetical protein | HMPREF1065_01491 | Not Available | Positive | 1713379 - 1714020 | 24003.9 |
| hypothetical protein | HMPREF1065_01492 | Not Available | Positive | 1714035 - 1715678 | 60728.7 |
| flavodoxin | HMPREF1065_01493 | Not Available | Negative | 1715764 - 1716288 | 19475.1 |
| hypothetical protein | HMPREF1065_01494 | Not Available | Negative | 1716361 - 1718394 | 75437.6 |
| hypothetical protein | HMPREF1065_01495 | Not Available | Negative | 1718423 - 1719772 | 49043.8 |
| lipoyltransferase and lipoate-protein ligase | HMPREF1065_01496 | Not Available | Negative | 1719839 - 1720591 | 28835.7 |
| dihydrolipoyl dehydrogenase | HMPREF1065_01497 | Not Available | Negative | 1720591 - 1721940 | 48329.9 |
| hypothetical protein | HMPREF1065_01498 | Not Available | Positive | 1722048 - 1722668 | 23409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

