Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01459 | Not Available | Positive | 1673158 - 1673451 | 11773.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | HMPREF1065_01460 | Not Available | Positive | 1673555 - 1675090 | 57327.7 |
| hypothetical protein | HMPREF1065_01461 | Not Available | Positive | 1675280 - 1676080 | 30021.9 |
| hypothetical protein | HMPREF1065_01462 | Not Available | Negative | 1676217 - 1677071 | 32942.3 |
| hypothetical protein | HMPREF1065_01463 | Not Available | Positive | 1677400 - 1678791 | 51896.5 |
| hypothetical protein | HMPREF1065_01464 | Not Available | Positive | 1678820 - 1680031 | 45984.5 |
| single-stranded-dna-specific exonuclease recj | HMPREF1065_01465 | Not Available | Positive | 1680197 - 1681918 | 64436.8 |
| recq family atp-dependent dna helicase | HMPREF1065_01466 | Not Available | Positive | 1682036 - 1683931 | 73084.3 |
| o-glcnacase | HMPREF1065_01467 | Not Available | Positive | 1683978 - 1686191 | 84882.3 |
| hypothetical protein | HMPREF1065_01468 | Not Available | Positive | 1686206 - 1687156 | 35745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

